Software

Raicu Group Software

Here you can find software developed by the Raicu group.

OptiMiS DC — software for spectral unmixing of spectrally resolved fluorescence images, as described in

  • Experimental Verification of the Kinetic Theory of FRET Using Optical Microspectroscopy and Obligate Oligomers, S. Patowary, L.F. Pisterzi, G. Biener, J.D. Holz, J.A. Oliver, J.W. Wells, V. Raicu. Biophysical Journal, 108:7 (2015) 1613-1622
  • FRET Spectrometry: A New Tool for the Determination of Protein Quaternary Structure in Living Cells, V. Raicu and D. Singh, Biophysical Journal 105, 1937-1945 (2013)
  • Determination of Supramolecular strucutre and spatial distribution of protein complexes in living cells, V. Raicu, M. R. Stoneman, R. Fung, M. Melnichuk, D. B. Jansma, L. F. Pisterzi, S. Rath, M. Fox, J. W. Wells, and D. K. Saldin, Nature Photonics 3, 107-113 (2009)

2D FIF Spectroscopy — Software for analysis of Fluorescence Intensity data, as described in

  • M. R. Stoneman, G. Biener, R. J. Ward, J. D. Pediani, D. Badu, A. Eis, I. Popa, G. Milligan, and V. Raicu, A general method to quantify ligand-driven oligomerization from flourescence-based images Nature Methods (2019)

FRET Spectrometry meta-histogram analysis